• RNDr. Tomáš Vaněček, Ph.D.
    RNDr. Tomáš Vaněček, Ph.D.

    vedoucí laboratoře molekulární genetiky

Seznam publikací

  1. Koleják R, Mraček J, Šubrt I, Vaněček T, Martínek P, Mezencev R, Farcas M, Švajdler M, Přibáň V. Primary Intracranial Sarcoma, DICER1-Mutant, Diagnosed by DNA Methylation Profiling in an Adult Patient with Germline DICER1 Mutation: A Case Report. Int J Surg Pathol. 2026;34(3):762-770.
  2. Bradová M, Slavík P, Vaněček T, Martínek P, Grossmann P, Kormunda S, Behenská K, Svatoň M, Pešek M, Jirásek T, Špůrková Z, Hroudová P, Mrázková H, Hořavová B, Roubec J, Baník M, Mukenšnábl P, Michal M, Švajdler M. Clinicopathologic features of KRAS G12C-mutated non-small cell lung carcinomas: insights from 279 retrospective cases. Virchows Arch. 2026 Apr 15. doi: 10.1007/s00428-026-04526-x.
  3. Michal M, Malik F, Mansour B, Hattery T, Dehner CA, Martínek P, Hájková V, Vaněček T, Chrisinger JSA, Machado I, Klubíčková N, Sumathi VP, Ng T, Warmke L, Oon ML, Petersson F, Argani P, Gross JM, Michal M, Antonescu CR, Dermawan JK. FET-Rearranged Myoepithelial Tumors Are Clinically Heterogeneous and Epigenetically Distinct from PLAG1-Rearranged Adnexal and Salivary Gland Myoepithelial Tumors. Clin Cancer Res. 2026;32(3):628-644.
  4. Farkas M, Agaimy A, Švajdler M, Hauer L, Martínek P, Vaněček T, Pivovarčíková K, Prchlíková B, Simpson RHW, Gočárová K, Vereš P, Slavík P, Behenská K, Marjanovic K, Michal M, Skálová A, Bradová M. SMARCA4-deficient carcinoma of the head and neck region: report of 8 new sinonasal and non-sinonasal cases and literature review. Virchows Arch. 2026 Mar 9. doi: 10.1007/s00428-026-04459-5.
  5. Skálová A, Bradová M, Laco J, Vaněček T, Hájková V, Martínek P, Grendár M, Querzoli G, Leivo I, Michal M. Basal cell adenoma with S100 protein-positive "stroma": a distinct triphasic salivary gland neoplasm characterized by CTNNB1 mutation. Virchows Arch. 2026;488(2):387-404.
  6. Hebeda KM, Boudová L, Corsten MF, Ptáková N, Haferlach T, de Graaf AO, Cermak J, Vanecek T, Jansen JH, Stevens-Kroef MJPL, Kroeze LI. Analysis of myeloid neoplasms with isolated trisomy 19 reveals a novel MDS subgroup characterized by the presence of ring sideroblasts, fibrosis and SRSF2 and/or ASXL1 mutations. J Hematop. 2025;18(1):45.
  7. Švajdler M, Brousil M, Soukup J, Netuka D, Kašparová P, Rychlý B, Jirásek T, Hendrych M, Farcas M, Pivovarčíková K, Vaněček T, Martínek P, Mezencev R. Glycoprotein nonmetastatic melanoma protein b immunohistochemistry can be a useful ancillary tool to diagnose subependymal giant cell astrocytoma. Virchows Arch. 2025 May 27. doi: 10.1007/s00428-025-04110-9.
  8. Bradová M, Costes-Martineau V, Laco J, Vaněček T, Grossmann P, Němcová J, Pavlovský Z, Skálová A, Michal M. Sinonasal adenosquamous carcinomas arising in seromucinous hamartoma or respiratory epithelial adenomatoid hamartoma with atypical features: Report of five detailed clinicopathological and molecular characterisation of rare entity. Histopathology. 2025;86(4):585-602.
  9. Michalova K, Strakova-Peterikova A, Ondic O, Vanecek T, Michal M, Hejhalova N, Holub P, Slavik P, Hluchy A, Gettse P, Daum O, Svajdler M, Michal M, Presl J. Next-generation sequencing in the molecular classification of endometrial carcinomas: Experience with 270 cases suggesting a potentially more aggressive clinical behavior of multiple classifier endometrial carcinomas. Virchows Arch. 2025;487(1):141-152.
  10. Pancsa T, Klubíčková N, Dashti NK, Machado I, Llombart-Bosch A, Linos K, Mosaieby E, Vaněček T, Maňáková L, Michal M, Michal M. GLI1::FOXO4-rearranged kidney tumors: a potentially distinct renal subtype within the spectrum of GLI1-altered tumors? Virchows Arch. 2025;486(4):751-757.
  11. Skálová A, Bradová M, Agaimy A, Laco J, Badual C, Ihrler S, Damjanov I, Rupp NJ, Bacchi CE, Mueller S, Ventelä S, Zhang D, Comperat E, Martínek P, Šíma R, Vaněček T, Grossmann P, Steiner P, Hájková V, Kovářová I, Michal M, Leivo I. Molecular Profiling of Sinonasal Adenoid Cystic Carcinoma: Canonical and Noncanonical Gene Fusions and Mutation. Am J Surg Pathol. 2025;49(3):227-242.
  12. Strych L, Zavoral T, Komrskova P, Vanecek T, Subrt I. Two de novo UBR1 variants in trans as a cause of Johanson-Blizzard syndrome. Biomed Pap Med Fac Univ Palacky Olomouc Czech Repub. 2025;169(2):98-106.
  13. Bradová M, Agaimy A, Laco J, Martínek P, Ing SK, Badoual C, Damjanov I, Leivo I, Bacchi CE, Comperat E, Ihrler S, Rupp NJ, Šíma R, Šteiner P, Vaněček T, Mueller S, Ventelä S, Skálová A, Michal M. Sinonasal adenoid cystic carcinomas accompanied by seromucinous hamartoma and/or atypical sinonasal glands arising from seromucinous hamartoma: insight into their histogenesis. Virchows Arch. 2025;486(6):1269-1287.
  14. Kaczorowski M, Chłopek M, Daum O, Ylaya K, Vaněček T, Szczepaniak M, Krawczyk K, Kowalik A, Michal M, Lasota J, Miettinen M. MMR deficiency is frequent in colorectal carcinomas with diffuse SLFN11 immunostaining: clinicopathologic and molecular study of 31 cases identified among 3,300 tumors. J Pathol Clin Res. 2025;11(2):e70025.
  15. Sangoi AR, Pivovarcikova K, Akgul M, Williamson SR, Ulamec M, Rogala JD, Martinek P, Vanecek T, Hes O, Alaghehbandan R. Chromophobe Renal Cell Carcinoma With Extensive Retraction Artifact: A Potential Diagnostic Pitfall From Micropapillary Urothelial Carcinoma. Int J Surg Pathol. 2025;33(1):5-12.
  16. Mansour B, Donati M, Pancsa T, Grossman P, Šteiner P, Vaněček T, Comová K, Michal M, Michal M. Molecular analysis of apocrine mixed tumors and cutaneous myoepitheliomas: a comparative study confirming a continuous spectrum of one entity with near-ubiquitous PLAG1 and rare mutually exclusive HMGA2 gene rearrangements. Virchows Arch. 2025;486(2):215-223.
  17. Michalová K, Presl J, Straková-Peteříková A, Ondič O, Vaneček T, Hejhalová N, Holub P, Slavík P, Hluchý A, Gettse P, Daum O, Švajdler M, Michal M. Advantages of next-generation sequencing (NGS) in the molecular classification of endometrial carcinomas - our experience with 270 cases. Ceska Gynekol. 2024;89(5):349-359.
  18. Kosemehmetoglu K, Mosaieby E, Šteiner P, Vaněček T, Baranovska-Andrigo V, Michal M. Calcifying Spindle Cell Soft Tissue Tumor With SOX10::PLAG1 Fusion: A Case Report of a Morphologically Distinctive and Potentially Novel Soft Tissue Tumor. Genes Chromosomes Cancer. 2024;63(6):e23249.
  19. Mickael ME, Kubick N, Atanasov AG, Martinek P, Horbańczuk JO, Floretes N, Michal M, Vanecek T, Paszkiewicz J, Sacharczuk M, Religa P. Using Copy Number Variation Data and Neural Networks to Predict Cancer Metastasis Origin Achieves High Area under the Curve Value with a Trade-Off in Precision. Curr Issues Mol Biol. 2024;46(8):8301-8319.
  20. Skálová A, Klubíčková N, Bradová M, Agaimy A, Rupp NJ, Damjanov I, Kolnikova G, Martínek P, Šteiner P, Grossmann P, Vaněček T, Michal M, Leivo I. Discovery of Novel TULP4/ACTN4/EWSR1/ACTB::MYB and ESRRG::DNM3 Fusions Expands Molecular Landscape of Adenoid Cystic Carcinoma Beyond Fusions Between MYB/MYBL1 and NFIB Genes. Am J Surg Pathol. 2024;48(12):1503-1511.
  21. Michal M, Skálová A, Hyrcza M, Laco J, Vaněček T, Rupp NJ, Michal M, Michalová K, Agaimy A, Bradová M. Nasal and sinonasal tumors formed by atypical adenomatous lesions arising in respiratory epithelial adenomatoid hamartoma/seromucinous hamartoma. Virchows Arch. 2024;485(1):31-42.
  22. Bradová M, Mosaieby E, Michal M, Vaněček T, Ing SK, Grossmann P, Koshyk O, Kinkor Z, Laciok Š, Nemcová A, Straka Ľ, Farkas M, Michal M, Švajdler M. Spindle cell rhabdomyosarcomas: With TFCP2 rearrangements, and novel EWSR1::ZBTB41 and PLOD2::RBM6 gene fusions. A study of five cases and review of the literature. Histopathology. 2024;84(5):776-793.
  23. Skálová A, Taheri T, Bradová M, Vaněček T, Franchi A, Slouka D, Kostlivý T, de Rezende G, Michálek J, Klubíčková N, Ptáková N, Nemcová A, Michal M, Agaimy A, Leivo I. SMARCB1-deficient sinonasal adenocarcinoma: a rare variant of SWI/SNF-deficient malignancy often misclassified as high-grade non-intestinal-type sinonasal adenocarcinoma or myoepithelial carcinoma. Virchows Arch. 2024;485(2):245-256.
  24. Klubíčková N, Dermawan JK, Mosaieby E, Martínek P, Vaněček T, Hájková V, Ptáková N, Grossmann P, Šteiner P, Švajdler M, Kinkor Z, Michalová K, Szepe P, Plank L, Hederová S, Kolenová A, Spasov NJ, Kosemehmetoglu K, Pažanin L, Špůrková Z, Baník M, Baumruk L, Meyer A, Kalmykova A, Koshyk O, Michal M, Michal M. Comprehensive clinicopathological, molecular, and methylation analysis of mesenchymal tumors with NTRK and other kinase gene aberrations. J Pathol. 2024;263(1):61-73.
  25. Skálová A, Bradová M, Michal M Jr, Mosaieby E, Klubíčková N, Vaněček T, Leivo I. Molecular pathology in diagnosis and prognostication of head and neck tumors. Virchows Arch. 2024;484(2):215-231.
  26. Bradová M, Thompson LDR, Hyrcza M, Vaněček T, Grossman P, Michal M Jr, Hájková V, Taheri T, Rupp N, Suster D, Lakhani S, Nikolov DH, Žalud R, Skálová A, Michal M, Agaimy A. Branchioma: immunohistochemical and molecular genetic study of 23 cases highlighting frequent loss of retinoblastoma 1 immunoexpression. Virchows Arch. 2024;484(1):103-117.
  27. Mansour B, Vanecek T, Kastnerova L, Nosek D, Kazakov DV, Donati M. Spitz Tumor With SQSTM1::NTRK2 Fusion: A Clinicopathological Study of 5 Cases. Am J Dermatopathol. 2023;45(5):306-310.
  28. Baněčková M, Thompson LDR, Hyrcza MD, Vaněček T, Agaimy A, Laco J, Simpson RHW, Di Palma S, Stevens TM, Brcic L, Etebarian A, Dimnik K, Majewska H, Stárek I, O'Regan E, Salviato T, Helliwell T, Horáková M, Biernat W, Onyuma T, Michal M, Leivo I, Skalova A. Salivary Gland Secretory Carcinoma: Clinicopathologic and Genetic Characteristics of 215 Cases and Proposal for a Grading System. Am J Surg Pathol. 2023;47(6):661-677.
  29. Kolm I, Konstantinova AM, Kutzner H, Barghorn A, Vanecek T, Mangana J, Kazakov DV. Cuticular Poroma: A Rare Poroma Variant Simulating a Malignant Neoplasm That Often Harbors YAP1::NUTM1 Fusions Similar to Their Conventional Counterparts. Am J Dermatopathol. 2023;45(8):544-548.
  30. Kulda V, Polivka J, Svaton M, Vanecek T, Buresova M, Houfkova K, Bagheri MS, Knizkova T, Vankova B, Windrichova J, Macan P, Babuska V, Pesta M. Next Generation Sequencing Analysis and its Benefit for Targeted Therapy of Lung Adenocarcinoma. Cancer Genomics Proteomics. 2023;20(4):404-411.
  31. Baněčková M, Michal M, Vaněček T, Grossman P, Nikolov DH, Včelák R, Žalud R, Michal M, Agaimy A. Branchioma with a nested/organoid morphology: molecular profiling of a distinctive potentially misleading variant and reappraisal of potential relationship to CD34-positive/Rb1-deficient tumors of the neck. Virchows Arch. 2023;483(4):541-548.
  32. Daumová Magdaléna, Hadravská Šárka, Peteříková Straková Andrea, Vaněček Tomáš, Matas Martin, Korečko Vladimír. SARS-CoV-2 placentitis - report of two cases and review of the literature. Ceska Gynekol. 2022;87(2):111-117.
  33. Skálová A, Baněčková M, Laco J, Di Palma S, Agaimy A, Ptáková N, Costes-Martineau V, Petersson BF, van den Hout MFCM, de Rezende G, Klubíčková N, Koblížek M, Koshyk O, Vaneček T, Leivo I. Sclerosing Polycystic Adenoma of Salivary Glands: A Novel Neoplasm Characterized by PI3K-AKT Pathway Alterations-New Insights Into a Challenging Entity. Am J Surg Pathol. 2022;46(2):268-280.
  34. Alaghehbandan R, Limani R, Ali L, Rogala J, Vanecek T, Steiner P, Hajkova V, Kuthi L, Slisarenko M, Michalova K, Pivovarcikova K, Hora M, Pitra T, Michal M, Hes O. Clear cell renal cell carcinoma with prominent microvascular hyperplasia: Morphologic, immunohistochemical and molecular-genetic analysis of 7 sporadic cases. Ann Diagn Pathol. 2022;56:151871.
  35. Donati M, Martinek P, Steiner P, Grossmann P, Vanecek T, Kastnerova L, Kolm I, Baneckova M, Donati P, Kletskaya I, Kalmykova A, Feit J, Blasch P, Szilagyi D, Baldi A, Persichetti P, Crescenzi A, Michal M, Kazakov DV. Novel insights into the BAP1-inactivated melanocytic tumor. Mod Pathol. 2022;35(5):664-675.
  36. Skálová A, Hyrcza MD, Vaneček T, Baněčková M, Leivo I. Fusion-positive salivary gland carcinomas. Genes Chromosomes Cancer. 2022;61(5):228-243.
  37. Pivovarcikova K, Alaghehbandan R, Vanecek T, Ohashi R, Pitra T, Hes O. TSC/mTOR Pathway Mutation Associated Eosinophilic/Oncocytic Renal Neoplasms: A Heterogeneous Group of Tumors with Distinct Morphology, Immunohistochemical Profile, and Similar Genetic Background. Biomedicines. 2022;10(2):322.
  38. Prochazkova K, Ptakova N, Alaghehbandan R, Williamson SR, Vaněček T, Vodicka J, Treska V, Rogala J, Pivovarcikova K, Michalova K, Slisarenko M, Hora M, Michal M, Hes O. Mutation Profile Variability in the Primary Tumor and Multiple Pulmonary Metastases of Clear Cell Renal Cell Carcinoma. A Review of the Literature and Analysis of Four Metastatic Cases. Cancers (Basel). 2021;13(23):5906.
  39. Skálová A, Agaimy A, Vanecek T, Baněčková M, Laco J, Ptáková N, Šteiner P, Majewska H, Biernat W, Corcione L, Eis V, Koshyk O, Vondrák J Jr, Michal M, Leivo I. Molecular Profiling of Clear Cell Myoepithelial Carcinoma of Salivary Glands With EWSR1 Rearrangement Identifies Frequent PLAG1 Gene Fusions But No EWSR1 Fusion Transcripts. Am J Surg Pathol. 2021;45(1):1-13.
  40. Daumova M, Svajdler M, Fabian P, Kren L, Babankova I, Jezova M, Sedivcova M, Vanecek T, Behenska K, Michal M, Daum O. SDHC Methylation Pattern in Patients With Carney Triad. Appl Immunohistochem Mol Morphol. 2021;29(8):599-605.
  41. Presl Jiří, Vaněček Tomáš, Michal Michael, Bouda Jiří, Kosťun Jan, Vlasák Pavel, Stráník Petr. Molecular classification of endometrial cancers translated into practice. Ceska Gynekol. 2021;86(4):258-262.
  42. Donati M, Kastnerova L, Cempírková D, Vaněček T, Michal M, Kazakov DV. Vulvar Pigmented Epithelioid Melanocytoma With a Novel HTT-PKN1 Fusion: A Case Report. Am J Dermatopathol. 2020;42(7):544-546.
  43. Vaňková B, Vaněček T, Ptáková N, Hájková V, Dušek M, Michal M, Švajdler P, Daum O, Daumová M, Michal M, Mezencev R, Švajdler M. Targeted next generation sequencing of MLH1-deficient, MLH1 promoter hypermethylated, and BRAF/RAS-wild-type colorectal adenocarcinomas is effective in detecting tumors with actionable oncogenic gene fusions. Genes Chromosomes Cancer. 2020;59(10):562-568.
  44. Pires-Luis AS, Martinek P, Alaghehbandan R, Trpkov K, Comperat EM, Perez Montiel DM, Bulimbasic S, Lobo J, Henrique R, Vanecek T, Pivovarcikova K, Michalova K, Pitra T, Hora M, Marques A, Lopes JM, Rogala J, Mareckova J, Michal M, Hes O. Molecular Genetic Features of Primary Nonurachal Enteric-type Adenocarcinoma, Urachal Adenocarcinoma, Mucinous Adenocarcinoma, and Intestinal Metaplasia/Adenoma: Review of the Literature and Next-generation Sequencing Study. Adv Anat Pathol. 2020;27(5):303-310.
  45. Skálová A, Banečkova M, Thompson LDR, Ptáková N, Stevens TM, Brcic L, Hyrcza M, Michal M Jr, Simpson RHW, Santana T, Michal M, Vaněček T, Leivo I. Expanding the Molecular Spectrum of Secretory Carcinoma of Salivary Glands With a Novel VIM-RET Fusion. Am J Surg Pathol. 2020;44(10):1295-1307.
  46. Kastnerova L, Martinek P, Grossmann P, Steiner P, Vanecek T, Kyclova J, Ferak I, Zalud R, Slehobr O, Svajdler P, Sulc M, Bradamante M, Banik M, Hadravsky L, Sticova E, Hajkova V, Ptakova N, Michal M, Kazakov DV. A Clinicopathological Study of 29 Spitzoid Melanocytic Lesions With ALK Fusions, Including Novel Fusion Variants, Accompanied by Fluorescence In Situ Hybridization Analysis for Chromosomal Copy Number Changes, and Both TERT Promoter and Next-Generation Sequencing Mutation Analysis. Am J Dermatopathol. 2020;42(8):578-592.
  47. Skálová A, Agaimy A, Stanowska O, Baneckova M, Ptáková N, Ardighieri L, Nicolai P, Lombardi D, Durzynska M, Corcione L, Laco J, Koshyk O, Žalud R, Michal M, Vanecek T, Leivo I. Molecular Profiling of Salivary Oncocytic Mucoepidermoid Carcinomas Helps to Resolve Differential Diagnostic Dilemma With Low-grade Oncocytic Lesions. Am J Surg Pathol. 2020;44(12):1612-1622.
  48. Wu B, Loh TKS, Vanecek T, Michal M, Petersson F. (Mammary Analogue) Secretory Carcinoma of the Nasal Cavity: Report of a Rare Case with p63 and DOG1 Expression and Uncommon Exon 4-Exon 14 ETV6-NTRK3 Fusion Diagnosed with Next Generation Sequencing. Head Neck Pathol. 2020;14(2):542-549.
  49. Svaton M, Vanecek T, Mukensnabl P, Baxa J, Krakorova G, Blazek J, Pesek M. Aggressive pulmonary adenocarcinoma with new FGFR translocation and cMET mutation not responsive to crizotinib and nintedanib treatment: a case report. Transl Cancer Res. 2020;9(3):2082-2088.
  50. Wong SBJ, Nga ME, Michal M, Vanecek T, Seet JE, Petersson F. SOX11 expression in a case of papillary thyroid carcinoma with fibromatosis/fasciitis-like stroma containing BRAF c.1799_1801delTGA and CTNNB1 c.133T>C mutations. Virchows Arch. 2019;475(4):519-525.
  51. Skálová A, Ptáková N, Santana T, Agaimy A, Ihrler S, Uro-Coste E, Thompson LDR, Bishop JA, Baněčkova M, Rupp NJ, Morbini P, de Sanctis S, Schiavo-Lena M, Vanecek T, Michal M, Leivo I. NCOA4-RET and TRIM27-RET Are Characteristic Gene Fusions in Salivary Intraductal Carcinoma, Including Invasive and Metastatic Tumors: Is "Intraductal" Correct? Am J Surg Pathol. 2019;43(10):1303-1313.
  52. Kojima F, Bulimbasic S, Alaghehbandan R, Martinek P, Vanecek T, Michalova K, Pivovarcikova K, Michal M, Hora M, Murata SI, Sugawara E, Rogala J, Limani R, Hes O. Clear cell renal cell carcinoma with Paneth-like cells: Clinicopathologic, morphologic, immunohistochemical, ultrastructural, and molecular analysis of 13 cases. Ann Diagn Pathol. 2019;41:96-101.
  53. Michal M, Agaimy A, Folpe AL, Zambo I, Kebrle R, Horch RE, Kinkor Z, Svajdler M, Vanecek T, Heidenreich F, Kazakov DV, Michalova K, Hadravsky L, Michal M. Tenosynovitis With Psammomatous Calcifications: A Distinctive Trauma-Associated Subtype of Idiopathic Calcifying Tenosynovitis With a Predilection for the Distal extremities of Middle-Aged Women-A Report of 23 Cases. Am J Surg Pathol. 2019;43(2):261-267.
  54. Alaghehbandan R, Vanecek T, Trpkov K, Comperat E, Kristiansen G, Svajdler M, Cempirkova D, Pavlovsky M, Pivovarcikova K, Stehlikova A, Hora M, Michal M, Hes O. High-grade Adenocarcinoma of the Prostate Mimicking Urothelial Carcinoma is Negative for TERT Mutations. Appl Immunohistochem Mol Morphol. 2019;27(7):523-528.
  55. Skálová A, Vanecek T, Uro-Coste E, Bishop JA, Weinreb I, Thompson LDR, de Sanctis S, Schiavo-Lena M, Laco J, Badoual C, Santana Conceiçao T, Ptáková N, Baněčkova M, Miesbauerová M, Michal M. Molecular Profiling of Salivary Gland Intraductal Carcinoma Revealed a Subset of Tumors Harboring NCOA4-RET and Novel TRIM27-RET Fusions: A Report of 17 cases. Am J Surg Pathol. 2018;42(11):1445-1455.
  56. Šteiner P, Pavelka J, Vaneček T, Miesbauerová M, Skálová A. Molecular methods for detection of prognostic and predictive markers in diagnosis of adenoid cystic carcinoma of the salivary gland origin. Cesk Patol. 2018;54(3):132-136.
  57. Skalova A, Vanecek T, Martinek P, Weinreb I, Stevens TM, Simpson RHW, Hyrcza M, Rupp NJ, Baneckova M, Michal M Jr, Slouka D, Svoboda T, Metelkova A, Etebarian A, Pavelka J, Potts SJ, Christiansen J, Steiner P, Michal M. Molecular Profiling of Mammary Analog Secretory Carcinoma Revealed a Subset of Tumors Harboring a Novel ETV6-RET Translocation: Report of 10 Cases. Am J Surg Pathol. 2018;42(2):234-246.
  58. Petersson F, Martinek P, Vanecek T, Pivovarcikova K, Peckova K, Ondic O, Perez-Montiel D, Skenderi F, Ulamec M, Nenutil R, Hora M, Svoboda T, Rotterova P, Dusek M, Michal M, Hes O. Renal Cell Carcinoma With Leiomyomatous Stroma: A Group of Tumors With Indistinguishable Histopathologic Features, But 2 Distinct Genetic Profiles: Next-Generation Sequencing Analysis of 6 Cases Negative for Aberrations Related to the VHL gene. Appl Immunohistochem Mol Morphol. 2018;26(3):192-197.
  59. Kazakov DV, Kyrpychova L, Martinek P, Grossmann P, Steiner P, Vanecek T, Pavlovsky M, Bencik V, Michal M, Michal M. ALK Gene Fusions in Epithelioid Fibrous Histiocytoma: A Study of 14 Cases, With New Histopathological Findings. Am J Dermatopathol. 2018;40(11):805-814.
  60. Baneckova M, Agaimy A, Andreasen S, Vanecek T, Steiner P, Slouka D, Svoboda T, Miesbauerova M, Michal M Jr, Skálová A. Mammary Analog Secretory Carcinoma of the Nasal Cavity: Characterization of 2 Cases and Their Distinction From Other Low-grade Sinonasal Adenocarcinomas. Am J Surg Pathol. 2018;42(6):735-743.
  61. Kyrpychova L, Vanecek T, Grossmann P, Martinek P, Steiner P, Hadravsky L, Belousova IE, Shelekhova KV, Svajdler M, Dubinsky P, Michal M, Kazakov DV. Small Subset of Adenoid Cystic Carcinoma of the Skin Is Associated With Alterations of the MYBL1 Gene Similar to Their Extracutaneous Counterparts. Am J Dermatopathol. 2018;40(10):721-726.
  62. Šteiner P, Andreasen S, Grossmann P, Hauer L, Vaněček T, Miesbauerová M, Santana T, Kiss K, Slouka D, Skálová A. Prognostic significance of 1p36 locus deletion in adenoid cystic carcinoma of the salivary glands. Virchows Arch. 2018;473(4):471-480.
  63. Kyrpychova L, Carr RA, Martinek P, Vanecek T, Perret R, Chottová-Dvořáková M, Zamecnik M, Hadravsky L, Michal M, Kazakov DV. Basal Cell Carcinoma With Matrical Differentiation: Clinicopathologic, Immunohistochemical, and Molecular Biological Study of 22 Cases. Am J Surg Pathol. 2017;41(6):738-749.
  64. Michal M, Kazakov DV, Hadravsky L, Michalova K, Grossmann P, Steiner P, Vanecek T, Renda V, Suster S, Michal M. Lipoblasts in spindle cell and pleomorphic lipomas: a close scrutiny. Hum Pathol. 2017;65:140-146.
  65. Konstantinova AM, Vanecek T, Martinek P, Kyrpychova L, Spagnolo DV, Stewart CJR, Portelli F, Michal M, Kazakov DV. Molecular alterations in lesions of anogenital mammary-like glands and their mammary counterparts including hidradenoma papilliferum, intraductal papilloma, fibroadenoma and phyllodes tumor. Ann Diagn Pathol. 2017;28:12-18.
  66. Skenderi F, Ulamec M, Vanecek T, Martinek P, Alaghehbandan R, Foix MP, Babankova I, Montiel DP, Alvarado-Cabrero I, Svajdler M, Dubinský P, Cempirkova D, Pavlovsky M, Vranic S, Daum O, Ondic O, Pivovarcikova K, Michalova K, Hora M, Rotterova P, Stehlikova A, Dusek M, Michal M, Hes O. Warthin-like papillary renal cell carcinoma: Clinicopathologic, morphologic, immunohistochemical and molecular genetic analysis of 11 cases. Ann Diagn Pathol. 2017;27:48-56.
  67. Peckova K, Martinek P, Pivovarcikova K, Vanecek T, Alaghehbandan R, Prochazkova K, Montiel DP, Hora M, Skenderi F, Ulamec M, Rotterova P, Daum O, Ferda J, Davidson W, Ondic O, Dubova M, Michal M, Hes O. Cystic and necrotic papillary renal cell carcinoma: prognosis, morphology, immunohistochemical, and molecular-genetic profile of 10 cases. Ann Diagn Pathol. 2017;26:23-30.
  68. Pivovarcikova K, Pitra T, Vanecek T, Alaghehbandan R, Gomolcakova B, Ondic O, Peckova K, Rotterova P, Hora M, Dusek M, Michal M, Hes O. Comparative study of TERT gene mutation analysis on voided liquid-based urine cytology and paraffin-embedded tumorous tissue. Ann Diagn Pathol. 2016;24:7-10.
  69. Skálová A, Šteiner P, Vaneček T. [New developments in molecular diagnostics ofcarcinomas of the salivary glands: "translocation carcinomas"]. Cesk Patol. 2016;52(3):139-45.
  70. Kyrpychova L, Kacerovska D, Vanecek T, Grossmann P, Michal M, Kerl K, Kazakov DV. Cutaneous hidradenoma: a study of 21 neoplasms revealing neither correlation between the cellular composition and CRTC1-MAML2 fusions nor presence of CRTC3-MAML2 fusions. Ann Diagn Pathol. 2016;23:8-13.
  71. Goh GH, Teh M, Vanecek T, Moran C, Petersson F. Primary pulmonary clear cell sarcoma-the first two reported cases. Virchows Arch. 2016;469(1):111-7.
  72. Hes O, Condom Mundo E, Peckova K, Lopez JI, Martinek P, Vanecek T, Falconieri G, Agaimy A, Davidson W, Petersson F, Bulimbasic S, Damjanov I, Jimeno M, Ulamec M, Podhola M, Sperga M, Pane Foix M, Shelekhova K, Kalusova K, Hora M, Rotterova P, Daum O, Pivovarcikova K, Michal M. Biphasic Squamoid Alveolar Renal Cell Carcinoma: A Distinctive Subtype of Papillary Renal Cell Carcinoma? Am J Surg Pathol. 2016;40(5):664-75.
  73. Rajan N, Andersson MK, Sinclair N, Fehr A, Hodgson K, Lord CJ, Kazakov DV, Vanecek T, Ashworth A, Stenman G. Overexpression of MYB drives proliferation of CYLD-defective cylindroma cells. J Pathol. 2016;239(2):197-205.
  74. Farkas K, Deák BK, Sánchez LC, Martínez AM, Corell JJ, Botella AM, Benito GM, López RR, Vanecek T, Kazakov DV, Kromosoeto JN, van den Ouweland AM, Varga J, Széll M, Nagy N. The CYLD p.R758X worldwide recurrent nonsense mutation detected in patients with multiple familial trichoepithelioma type 1, Brooke-Spiegler syndrome and familial cylindromatosis represents a mutational hotspot in the gene. BMC Genet. 2016; 9;17:36.
  75. Skálová A, Vanecek T, Simpson RH, Laco J, Majewska H, Baneckova M, Steiner P, Michal M. Mammary Analogue Secretory Carcinoma of Salivary Glands: Molecular Analysis of 25 ETV6 Gene Rearranged Tumors With Lack of Detection of Classical ETV6-NTRK3 Fusion Transcript by Standard RT-PCR: Report of 4 Cases Harboring ETV6-X Gene Fusion. Am J Surg Pathol. 2016;40(1):3-13.
  76. Tantcheva-Poór I, Vanecek T, Lurati MC, Rychly B, Kempf W, Michal M, Kazakov DV. Report of Three Novel Germline CYLD Mutations in Unrelated Patients with Brooke-Spiegler Syndrome, Including Classic Phenotype, Multiple Familial Trichoepitheliomas and Malignant Transformation. Dermatology. 2016;232(1):30-7.
  77. Kinkor Z, Mečiarová I, Grossman P, Vaneček T, Švec A, Kokavec M. [Small cell type (Ewing-like) clear cell sarcoma of soft parts: a case report]. Cesk Patol. 2015;51(1):42-6.
  78. Vanecek T., Walker K., Watson LL., Rao A, Rampisela D, Donner LR. Molecular genetic data favoring a sequential clonal transformation of a large B cell lymphoma into an anaplastic large T cell lymphoma, ALK-negative. J Hematopathol 2015;8(4): 243-53.
  79. Skálová A, Weinreb I, Hyrcza M, Simpson RH, Laco J, Agaimy A, Vazmitel M,Majewska H, Vanecek T, Talarčik P, Manajlovic S, Losito SN, Šteiner P, Klimkova A, Michal M. Clear cell myoepithelial carcinoma of salivary glands showing EWSR1 rearrangement: molecular analysis of 94 salivary gland carcinomas with prominent clear cell component. Am J Surg Pathol. 2015;39(3):338-48.
  80. Kempf W, Kazakov DV, Szep Z, Vanecek T. CD30+ clonal T-cell lymphoid proliferation of the skin in a patient with hypereosinophilic syndrome. J Cutan Pathol. 2015;42(2):130-5.
  81. Peckova K, Vanecek T, Martinek P, Spagnolo D, Kuroda N, Brunelli M, Vranic S, Djuricic S, Rotterova P, Daum O, Kokoskova B, Vesela P, Pivovarcikova K, Bauleth K, Dubova M, Kalusova K, Hora M, Michal M, Hes O. Aggressive and nonaggressive translocation t(6;11) renal cell carcinoma: comparative study of 6 cases and review of the literature. Ann Diagn Pathol. 2014 Dec;18(6):351-7.
  82. Vanecek T, Halbhuber Z, Kacerovska D, Martinek P, Sedivcova M, Carr RA, Slouka D, Michal M, Kazakov DV. Large Germline Deletions of the CYLD Gene in Patients With Brooke-Spiegler Syndrome and Multiple Familial Trichoepithelioma. Am J Dermatopathol. 2014;36(11):868-74.
  83. Hora M, Urge T, Trávníček I, Ferda J, Chudáček Z, Vaněček T, Michal M ,Petersson F, Kuroda N, Hes O. MiT translocation renal cell carcinomas: two subgroups of tumours with translocations involving 6p21 [t (6; 11)] and Xp11.2 [t(X;1 or X or 17)]. Springerplus. 2014;3:245.
  84. Kinkor Z, Vaneček T, Svajdler M Jr, Mukenšnabl P, Veselý K, Baxa J, Kokavec M. Where does Ewing sarcoma end and begin - two cases of unusual bone tumors with t(20;22)(EWSR1-NFATc2) alteration. Cesk Patol. 2014;50(2):87-91.
  85. Hes O, Pivovarcikova K, Stehlik J, Martinek P, Vanecek T, Bauleth K, Dolejsova O, Petersson F, Hora M, Perez Montiel D, Peckova K, Branzovsky J, Slouka D, Vodicka J, Kokoskova B, Matej R, Michal M. Choriogonadotropin positive seminoma-a clinicopathological and molecular genetic study of 15 cases. Ann Diagn Pathol. 2014;18(2):89-94.
  86. Beneš Z, Sedivcová M, Antoš Z, Kohout P, Puškárová G, Cerník M, Rozmahel M, Shánělová M, Dolina J, Hep A, Trubač M, Stehlík J, Vaněček T, Michal M, Simša J, Kala Z. The new blood test bio-marker SEPT9 and colorectal carcinoma screening. Vnitr Lek. 2013;59(11):971-6.
  87. Skálová A, Vanecek T, Majewska H, Laco J, Grossmann P, Simpson RH, Hauer L, Andrle P, Hosticka L, Branžovský J, Michal M. Mammary analogue secretory carcinoma of salivary glands with high-grade transformation: report of 3 cases with the ETV6-NTRK3 gene fusion and analysis of TP53, ß-catenin, EGFR, and CCND1 genes. Am J Surg Pathol. 2014;38(1):23-33.
  88. Skálová A, Vanecek T, Simpson RH, Vazmitsel MA, Majewska H, Mukensnabl P, Hauer L, Andrle P, Hosticka L, Grossmann P, Michal M. CRTC1-MAML2 and CRTC3-MAML2 fusions were not detected in metaplastic Warthin tumor and metaplastic pleomorphic adenoma of salivary glands. Am J Surg Pathol. 2013;37(11):1743-50.
  89. Sedivcová M, Martínek P, Stehlík J, Grossmann P, Kašpírková J, Vaneček T. Sequencing - classical method. Cesk Patol. 2013;49(3):122-8. ¨
  90. Sperga M, Martinek P, Vanecek T, Grossmann P, Bauleth K, Perez-Montiel D, Alvarado-Cabrero I, Nevidovska K, Lietuvietis V, Hora M, Michal M, Petersson F, Kuroda N, Suster S, Branzovsky J, Hes O. Chromophobe renal cell carcinoma--chromosomal aberration variability and its relation to Paner grading system: an array CGH and FISH analysis of 37 cases. Virchows Arch. 2013;463(4):563-73.
  91. Kacerovská D, Szép Z, Kolláriková L, Vaneček T, Michal M, Daniš D, Kazakov D. A novel germline mutation in the CYLD gene in a Slovak patient with Brooke-Spiegler syndrome. Cesk Patol. 2013;49(2):89-92.
  92. Skálová A, Kašpírková J, Andrle P, Hostička L, Vaneček T. Human papillomaviruses are not involved in the etiopathogenesis of salivary gland tumors. Cesk Patol. 2013;49(2):72-5.
  93. Laco J, Švajdler M Jr, Andrejs J, Hrubala D, Hácová M, Vaněček T, Skálová A, Ryška A. Mammary analog secretory carcinoma of salivary glands: a report of 2 cases with expression of basal/myoepithelial markers (calponin, CD10 and p63 protein). Pathol Res Pract. 2013;209(3):167-72.
  94. Steiner P, Hora M, Stehlik J, Martinek P, Vanecek T, Petersson F, Michal M, Korabecna M, Travnicek I, Hes O. Tubulocystic renal cell carcinoma: is there a rational reason for targeted therapy using angiogenic inhibition? Analysis of seven cases. Virchows Arch. 2013;462(2):183-92.
  95. Grossmann P, Vanecek T, Steiner P, Kacerovska D, Spagnolo DV, Cribier B, Rose C, Vazmitel M, Carlson JA, Emberger M, Martinek P, Pearce RL, Pearn J, Michal M, Kazakov DV. Novel and recurrent germline and somatic mutations in a cohort of 67 patients from 48 families with Brooke-Spiegler syndrome including the phenotypic variant of multiple familial trichoepitheliomas and correlation with the histopathologic findings in 379 biopsy specimens. Am J Dermatopathol. 2013;35(1):34-44.
  96. Hester CC, Moscato EE, Kazakov DV, Vanecek T, Moretto JC, Seiff SR. A new Cylindromatosis (CYLD) gene mutation in a case of Brooke-Spiegler syndrome masquerading as basal cell carcinoma of the eyelids. Ophthal Plast Reconstr Surg. 2013;29(1):e10-1.
  97. Kacerovska D, Vanecek T, Spagnolo DV, Bisceglia M, Zelger B, Michal M, Kazakov DV. A clinicopathologic and molecular biologic study of patients presenting with few adnexal tumors (two to four) from the morphological spectrum of Brooke-Spiegler syndrome. Am J Dermatopathol. 2013;35(1):19-24.
  98. Ohe C, Kuroda N, Hes O, Michal M, Vanecek T, Grossmann P, Tanaka Y, Tanaka M, Inui H, Komai Y, Matsuda T, Uemura Y. A renal epithelioid angiomyolipoma/perivascular epithelioid cell tumor with TFE3 gene break visualized by FISH. Med Mol Morphol. 2012;45(4):234-7.
  99. Kacerovska D, Kerl K, Michal M, Filipova H, Vrtel R, Vanecek T, Zelenakova H, Kraus J, Kodet R, Kazakov DV. Giant angiofibromas in tuberous sclerosis complex: a possible role for localized lymphedema in their pathogenesis. J Am Acad Dermatol. 2012;67(6):1319-26.
  100. Petersson F, Vaněček T, Michal M, Martignoni G, Brunelli M, Halbhuber Z, Spagnolo D, Kuroda N, Yang X, Cabrero IA, Hora M, Branžovský J, Trivunic S, Kacerovská D, Steiner P, Hes O. A distinctive translocation carcinoma of the kidney; "rosette forming," t(6;11), HMB45-positive renal tumor: a histomorphologic, immunohistochemical, ultrastructural, and molecular genetic study of 4 cases. Hum Pathol. 2012;43(5):726-36.
  101. Linos K, Schwartz J, Kazakov DV, Vanecek T, Carlson JA. Recurrent CYLD nonsense mutation associated with a severe, disfiguring phenotype in an African American family with multiple familial trichoepithelioma. Am J Dermatopathol. 2011;33(6):640-2.
  102. Petersson F, Michal M, Vaněček T, Hora M, Trivunic S, Halbhuber Z, Hes O. Bilateral renal tumors; conventional clear cell carcinoma and contralateral t(6;11)/t(X;17)-like tumor Histomorphologic, immunohistochemical, ultrastructural and molecular genetic studies including the report of a novel mutation in the VHL gene. Ann Diagn Pathol. 2011;15(5):362-9.
  103. Kazakov DV, Vanecek T, Zelger B, Carlson JA, Spagnolo DV, Schaller J, Nemcova J, Kacerovska D, Vazmitel M, Sangüeza M, Emberger M, Belousova I,Fernandez-Figueraz MT, Kempf W, Meyer DR, Rütten A, Baltaci M, Michal M. Multiple(familial) trichoepitheliomas: a clinicopathological and molecular biologicalstudy, including CYLD and PTCH gene analysis, of a series of 16 patients. Am JDermatopathol. 2011;33(3):251-65.
  104. Hes O, Vaněček T, Petersson F, Grossmann P, Hora M, Perez Montiel DM, SteinerP, Dvořák M, Michal M. Mutational Analysis (c.402C>G) of the FOXL2 Gene andImmunohistochemical Expression of the FOXL2 Protein in Testicular Adult TypeGranulosa Cell Tumors and Incompletely Differentiated Sex Cord Stromal Tumors.Appl Immunohistochem Mol Morphol. 2011;19(4):347-51.
  105. Kazakov DV, Hantschke M, Vanecek T, Kacerovska D, Michal M. Mammary-type secretory carcinoma of the skin. Am J Surg Pathol. 2010;34(8):1226-7.
  106. Sima R, Vanecek T, Kacerovska D, Trubac P, Cribier B, Rutten A, Vazmitel M,Spagnolo DV, Litvik R, Vantuchova Y, Weyers W, Pearce RL, Pearn J, Michal M,Kazakov DV. Brooke-Spiegler syndrome: report of 10 patients from 8 families with novel germline mutations: evidence of diverse somatic mutations in the same patient regardless of tumor type. Diagn Mol Pathol. 2010;19(2):83-91.
  107. Gatalica Z, Hes O, Vanecek T, Sanger W. Renal smooth muscle hamartoma. Pathol Res Pract. 2010 Nov 15;206(11):782-4.
  108. Petersson F, Grossmann P, Vanecek T, Coric M, Cacic M, Hes O, Michal M. Testicular germ cell tumor composed of placental site trophoblastic tumor and teratoma. Hum Pathol. Hum Pathol. 2010;41(7):1046-50.
  109. Kazakov DV, Schaller J, Vanecek T, Kacerovska D, Michal M. Brooke-Spiegler syndrome: report of a case with a novel mutation in the CYLD gene and different types of somatic mutations in benign and malignant tumors. J Cutan Pathol. 2010;37(8):886-90.
  110. Woźniak M, Malyarchuk B, Derenko M, Vanecek T, Lazur J, Gomolcak P, Grzybowski T. Similarities and distinctions in Y chromosome gene pool of Western Slavs. Am J Phys Anthropol. Am J Phys Anthropol. 2010;142(4):540-8.
  111. Malyarchuk B, Derenko M, Grzybowski T, Perkova M, Rogalla U, Vanecek T, Tsybovsky I. The peopling of Europe from the mitochondrial haplogroup U5 perspective. PLoS One. 2010;5(4):e10285.
  112. Skálová A, Vanecek T, Sima R, Laco J, Weinreb I, Perez-Ordonez B, Starek I, Geierova M, Simpson RH, Passador-Santos F, Ryska A, Leivo I, Kinkor Z, Michal M. Mammary analogue secretory carcinoma of salivary glands, containing the ETV6-NTRK3 fusion gene: a hitherto undescribed salivary gland tumor entity. Am J Surg Pathol. 2010;34(5):599-608. 4.020, 0147-5185
  113. Reischig T, Nemcová J, Vanecek T, Jindra P, Hes O, Bouda M, Treska V. Intragraft cytomegalovirus infection: a randomized trial of valacyclovir prophylaxis versus pre-emptive therapy in renal transplant recipients. Antivir Ther. 2010;15(1):23-30.
  114. Kazakov DV, Grossmann P, Spagnolo DV, Vanecek T, Vazmitel M, Kacerovska D, Zelger B, Calonje E, Michal M. Expression of p53 and TP53 mutational analysis in malignant neoplasms arising in preexisting spiradenoma, cylindroma, and spiradenocylindroma, sporadic or associated with Brooke-Spiegler syndrome. Am J Dermatopathol. 2010;32(3):215-21. 1.477, 0193-1091
  115. Kazakov DV, Vanecek T, Nemcova J, Kacerovska D, Spagnolo DV, Mukensnabl P, Michal M. Spectrum of Tumors With Follicular Differentiation in a Patient With the Clinical Phenotype of Multiple Familial Trichoepitheliomas: A Clinicopathological and Molecular Biological Study, Including Analysis of the CYLD and PTCH Genes. Am J Dermatopathol. 2009;31(8):819-27. 1.477, 0193-1091
  116. Kazakov DV, Thoma-Uszynski S, Vanecek T, Kacerovska D, Grossmann P, Michal M. A Case of Brooke-Spiegler Syndrome With a Novel Germline Deep Intronic Mutation in the CYLD Gene Leading to Intronic Exonization, Diverse Somatic Mutations, and Unusual Histology. Am J Dermatopathol 2009;31:664–673. 1.477, 0193-1091
  117. Kacerovska D, Vrtel R, Michal M, Vanecek T, Vodicka R, Kreuzberg B, Ricarova R, Pizinger K, Danis D, Reischig T, Kazakov DV. TSC2/PKD1 contiguous gene syndrome: a report of 2 cases with emphasis on dermatopathologic findings. Am J Dermatopathol. 2009;31(6):532-541. 1.477, 0193-1091
  118. Kazakov DV, Benkova K, Michal M, Vanecek T, Kacerovska D, Skalova A. Skin type spiradenoma of the parotid gland with malignant transformation Report of a case with analysis of the CYLD gene. Hum Pathol. 2009;40(10):1499-1503. 3.322, 0046-8177
  119. Skálová A, Sima R, Vanecek T, Muller S, Korabecna M, Nemcova J, Elmberger G, Leivo I, Passador-Santos F, Walter J, Rousarova M, Jedlickova K, Curik R, Geierova M, Michal M. Acinic cell carcinoma with high-grade transformation: a report of 9 cases with immunohistochemical study and analysis of TP53 and HER-2/neu genes. Am J Surg Pathol. 2009;33(8):1137-1145. 4.020, 0147-5185
  120. Belousova IE, Vanecek T, Skreg SV, Rodionov AN, Samtsov AV, Kazakov DV. Unusual clinicopathological presentation of primary cutaneous diffuse large B-cell lymphoma, leg type, with multiple nodules and widespread garland-like lesions. Am J Dermatopathol. 2009;31(4):370-374. 1.477, 0193-1091
  121. Kacerovska D, Michal M, Nemcova J, Vanecek T, Kreuzberg B, Mrazkova P, Koudela K Jr, Kazakov DV. Crystal-deficient alveolar soft-part sarcoma with cutaneous involvement: a case report. Am J Dermatopathol. 2009;31(3):272-277. 1.477, 0193-1091
  122. Kazakov DV, Sima R, Vanecek T, Kutzner H, Palmedo G, Kacerovska D, Grossmann P, Michal M. Mutations in exon 3 of the CTNNB1 gene (beta-catenin gene) in cutaneous adnexal tumors. Am J Dermatopathol. 2009;31(3):248-255. 1.477, 0193-1091
  123. Kazakov DV, Ivan D, Kutzner H, Spagnolo DV, Grossmann P, Vanecek T, Sima R, Kacerovska D, Shelekhova KV, Denisjuk N, Hillen U, Kuroda N, Mukensnabl P, Danis D, Michal M. Cutaneous hidradenocarcinoma: a clinicopathological, immunohistochemical, and molecular biologic study of 14 cases, including Her2/neu gene expression/amplification, TP53 gene mutation analysis, and t(11;19) translocation. Am J Dermatopathol. 2009 ;31(3):236-247. 1.477, 0193-1091
  124. Kazakov DV, Zelger B, Rütten A, Vazmitel M, Spagnolo DV, Kacerovska D, Vanecek T, Grossmann P, Sima R, Grayson W, Calonje E, Koren J, Mukensnabl P, Danis D, Michal M. Morphologic Diversity of Malignant Neoplasms Arising in Preexisting Spiradenoma, Cylindroma, and Spiradenocylindroma Based on the Study of 24 Cases, Sporadic or Occurring in the Setting of Brooke-Spiegler Syndrome. Am J Surg Pathol. 2009 33(5):705-719. 4.020, 0147-5185
  125. Malyarchuk B, Perenko M, Perkova M, Vanecek T. Mitochondrial Haplogroup U2d Phylogeny and Distribution. Hum Biol. 2008;80(5):565-571. 0.807, 0018-7143
  126. Kacerovska D, Szepe P, Vanecek T, Nemcova J, Michal M, Mukensnabl P, Kazakov DV. Spiradenocylindroma-like basaloid carcinoma of the anus and rectum: case report, including HPV studies and analysis of the CYLD gene mutations. Am J Dermatopathol. 2008;30(5):472-476. 1.477, 0193-1091
  127. Belousova IE, Vanecek T, Samtsov AV, Michal M, Kazakov DV. A patient with clinicopathologic features of small plaque parapsoriasis presenting later with plaque-stage mycosis fungoides: report of a case and comparative retrospective study of 27 cases of "nonprogressive" small plaque parapsoriasis. J Am Acad Dermatol. 2008;59(3):474-482. 4.081, 0190-9622
  128. Kazakov DV, Belousova IE, Kacerovska D, Sima R, Vanecek T, Vazmitel M, Pizinger K, Michal M.Hyperplasia of hair follicles and other adnexal structures in cutaneous lymphoproliferative disorders: a study of 53 cases, including so-called pseudolymphomatous folliculitis and overt lymphomas. Am J Surg Pathol. 2008;32(10):1468-1478. 4.020, 0147-5185
  129. Gatalica Z, Lilleberg SL, Koul MS, Vanecek T, Hes O, Wang B, Michal M. COX-2 gene polymorphisms and protein expression in renomedullary interstitial cell tumors. Hum Pathol. 2008;39(10):1495-504. 3.322, 0046-8177
  130. Malyarchuk B, Grzybowski T, Derenko M, Perkova M, Vanecek T, Lazur J, Gomolcak P, Tsybovsky I Mitochondrial DNA phylogeny in Eastern and Western Slavs. Mol Biol Evol. 2008;25(8):1651-1658. 7.280, 0737-4038
  131. Malyarchuk BA, Derenko M, Perkova M, Grzybowski T, Vanecek T, Lazur J. Reconstructing the phylogeny of African mitochondrial DNA lineages in Slavs. Eur J Hum Genet. 2008 ;16(9):1091-1096. 3.925, 1018-4813
  132. Daum O, Vanecek T, Benes Z, Michal M. Progress in molecular diagnostics of gastrointestinal stromal tumors. Expert Opinion on Medical Diagnostics, 2007; 1 (3) 315-324. ---, 1753-0059
  133. Králícková M, Ulcová-Gallová Z, Síma R, Vanecek T, Síma P, Krizan J, Suchá R, Uher P, Hes O, Novotný Z, Rokyta Z, Vetvicka V. Association of the leukemia inhibitory factor gene mutation and the antiphospholipid antibodies in the peripheral blood of infertile women. Folia Microbiol (Praha). 2007;52(5):543-548. 1.172, 0015-5632
  134. Malyarchuk BA, Perkova MA, Derenko MV, Vanecek T, Lazur J, Gomolcak P. Mitochondrial DNA variability in Slovaks, with application to the Roma origin. Ann Hum Genet. 2008;72(Pt 2):228-240. 2.195, 0003-4800
  135. Hes O, Michal M, Síma R, Vanecek T, Brunelli M, Martignoni G, Kuroda N, Alvarado Cabrero I, Perez-Montiel D, Hora M, Urge T, Dvorák M, Jarosová M, Yang X. Renal oncocytoma with and without intravascular extension into the branches of renal vein have the same morphological, immunohistochemical, and genetic features. Virchows Arch. 2008;452(2):193-200. 2.082, 0945-6317
  136. Králícková M, Síma R, Martínek P, Vanecek T, Ulcová-Gallová Z, Síma P, Krizan J, Kalis V, Stepán Jr, Stepán J, Rokyta Z, Uher P, Hes O. The leukemia inhibitory factor gene mutations in the population of infertile women: the heterozygote transition G to A on the position 3400 does not affect the outcome of the infertility treatment. Ceska Gynekol. 2007;72(4):293-298. ---, 1210-7832
  137. Derenko M, Malyarchuk B, Grzybowski T, Denisova G, Dambueva I, Perkova M, Dorzhu C, Luzina F, Lee HK, Vanecek T, Villems R, Zakharov I. Phylogeographic analysis of mitochondrial DNA in northern Asian populations. Am J Hum Genet. 2007;81(5):1025-1041. 11.092, 0002-9297
  138. Michal M, Kazakov DV, Síma R, Vanecek T. Primitive small cell tumor with epithelial, gangliocytic, neuroendocrine, and mesenchymal differentiation: report of 2 cases. Int J Surg Pathol. 2007;15(4):429-436. 1.078, 1066-8969
  139. Kazakov DV, Vanecek T, Belousova IE, Mukensnabl P, Kollertova D, Michal M. Skin-Type Hidradenoma of the Breast Parenchyma With t(11;19) Translocation: Hidradenoma of the Breast. Am J Dermatopathol. 2007;29(5):457-461. 1.503, 0193-1091
  140. Kazakov DV, Curik R, Vanecek T, Mukensnabl P, Michal M. Nodular Hyperplasia of the Bartholin Gland: A Clinicopathological Study of Two Cases, Including Detection of Clonality by HUMARA. Am J Dermatopathol. 2007;29(4):385-387. 1.503, 0193-1091
  141. Boudová L.; Kazakov D. V.; Jindra P.; Pizinger K.; Šíma R.; Vaněček T.; Kuntscher V.; Vozobulová V.; Mukenšnabl P.; Michal M. Primární kožní velkobuněčný anaplastický T-lymfom s koexpresí CD30 a CD56, bohatý na neutrofily a histiocyty. Popis raritního případu s přehledem literatury.Klinická onkologie 2007;20(3):260 – 263. ---, 0862-495X
  142. Kazakov DV, Bisceglia M, Spagnolo DV, Kutzner H, Belousova IE, Hes O, Sima R, Vanecek T, Yang Y, Michal M. Apocrine Mixed Tumors of the Skin With Architectural and/or Cytologic Atypia: A Retrospective Clinicopathologic Study of 18 Cases. Am J Surg Pathol. 2007;31(7):1094-1102. 4.181, 0147-5185
  143. Melichar B, Laco J, Slovacek L, Grossmann P, Vanecek T. Fatal Venous Trombembolism Complicating Imatinib Therapy in a Patient with Metastatic Gastrointestinal Stroma Tumor. J Exp Clin Cancer Res. 2007; 25(4):607-610. 1.503, 0392-9078
  144. Daum O, Grossmann P, Vanecek T, Sima R, Mukensnabl P, Michal M. Diagnostic morphological features of PDGFRA-mutated gastrointestinal stromal tumors: molecular genetic and histologic analysis of 60 cases of gastric gastrointestinal stromal tumors. Ann Diagn Pathol. 2007;11(1):27-33. ---, 1092-9134
  145. Malyarchuk BA, Vanecek T, Perkova MA, Derenko MV, Sip M. Mitochondrial DNA Variability in Czech Population, with Application to Ethnic History of Slavs. Hum Biol. 2006;78(6):681-696. 1.132, 0018-7143
  146. Daum O, Vaněček T, Šíma R, Michal M. Gastrointestinální stromální tumor:současný pohled. Klinická onkologie 2006;19(4): 203-211. ---, 0862-495X
  147. Kazakov DV, Kutzner H, Palmedo G, Boudova L, Michaelis S, Michal M, Vanecek T, Magro CM, Mukensnabl P, Dummer R, Burg G, Kempf W. Primary Cutaneous Lymphoproliferative Disorders With Dual Lineage Rearrangement. Am J Dermatopathol. 2006 ;28(5):399-409. 1.100, 0193-1091
  148. Boudova L, Kazakov DV, Jindra P, Sima R, Vanecek T, Kuntscher V, Vera V, Bouda J, Michal M. Primary cutaneous histiocyte and neutrophil-rich CD30+ and CD56+ anaplastic large-cell lymphoma with prominent angioinvasion and nerve involvement in the forehead and scalp of an immunocompetent woman. J Cutan Pathol. 2006;33(8):584-589. 1.582, 0303-6987
  149. Skalova A, Gnepp DR, Simpson RH, Lewis JE, Janssen D, Sima R, Vanecek T, Di Palma S, Michal M. Clonal nature of sclerosing polycystic adenosis of salivary glands demonstrated by using the polymorphism of the human androgen receptor (HUMARA) locus as a marker. Am J Surg Pathol. 2006;30(8):939-944. 4.144, 0147-5185
  150. Kazakov DV, Hugel H, Vanecek T, Michal M. Unusual hyperplasia of anogenital mammary-like glands. Am J Dermatopathol. 2006;28(2):134-137. 1.100, 0193-1091
  151. Kralickova M, Sima R, Vanecek T, Sima P, Rokyta Z, Ulcova-Gallova Z, Sucha R, Uher P, Hes O. Leukemia inhibitory factor gene mutations in the population of infertile women are not restricted to nulligravid patients. Eur J Obstet Gynecol Reprod Biol. 2006;127(2):231-235. 1.273, 0301-2115
  152. Brdicka R, Beranek M, Cimburova M, Dvorackova J, Dvorakova D, Hajkova J, Haskovec C, Kebrdlova V, Karas M, Kratochvilova A, Losan F, Macek M Jr, Musil F, Putzova M, Rozmanova S, Riedlova P, Safrova M, Scheinost O, Stolba P, Trka J, Vanecek T, Vrtel R. Frequentational view on the genome changes testing. Cas Lek Cesk. 2006;145(2):98-103. ---, 0008-7335
  153. Michal M, Vanecek T, Sima R, Mukensnabl P, Hes O, Kazakov DV, Matoska J, Zuntova A, Dvorak V, Talerman A. Mixed germ cell sex cord-stromal tumors of the testis and ovary. Morphological, immunohistochemical, and molecular genetic study of seven cases. Virchows Arch. 2006;448(5):612-622. 2.251, 0945-6317
  154. Melichar B, Voboril Z, Nozicka J, Ryska A, Urminska H, Vanecek T, Michal M. Pathological complete response in advanced gastrointestinal stromal tumor after imatinib therapy. Intern Med. 2005 ;44(11):1163-1168. 0.643, 0918-2918
  155. Vanecek T, Trubac P, Vorel F, Sip M. Population genetics of 11 nuclear and 1 mitochondrial short tandem repeat loci in a population of South Bohemia, Czech Republic. J Appl Biomed 2005;3(3):129-131. ---, 1214-021X
  156. Boudova L, Kazakov DV, Sima R, Vanecek T, Torlakovic E, Lamovec J, Kutzner H, Szepe P, Plank L, Bouda J, Hes O, Mukensnabl P, Michal M. Cutaneous Lymphoid Hyperplasia and Other Lymphoid Infiltrates of the Breast Nipple: A Retrospective Clinicopathologic Study of Fifty-Six Patients. Am J Dermatopathol. 2005;27(5):375-386. 1.377, 0193-1091
  157. Kazakov DV, Vanecek T, Sima R, Kutzner H, Michal M. Dendritic cell neurofibroma with pseudorosettes lacks mutations in exons 1-15 of the neurofibromatosis type 2 gene. Am J Dermatopathol 2005; 27(4):286-289. 1.377, 0193-1091
  158. Kazakov DV, Suster S, Leboit PE, Calonje E, Bisceglia M, Kutzner H, Rutten A, Mentzel T, Schaller J, Zelger B, Baltaci M, Leivo I, Rose C, Fukunaga M, Simpson RH, Yang Y, Carlson JA, Cavazza A, Hes O, Mukensnabl P, Vanecek T, Fidalgo A, Pizinger K, Michal M. Mucinous Carcinoma of the Skin, Primary, and Secondary: A Clinicopathologic Study of 63 Cases With Emphasis on the Morphologic Spectrum of Primary Cutaneous Forms: Homologies With Mucinous Lesions in the Breast. Am J Surg Pathol. 2005 ;29(6):764-782. 4.377, 0147-5185
  159. Daum O, Klecka J, Ferda J, Treska V, Vanecek T, Sima R, Mukensnabl P, Michal M. Gastrointestinal stromal tumor of the pancreas: case report with documentation of KIT gene mutation. Virchows Arch. 2005; 446(4):470-472 . 2.224, 0945-6317
  160. Hes, O, Vanecek T, Perez-Montiel DM, Alvarado Cabrero I, Hora M, Suster S, Lamovec J, Curik R, Mandys V, Michal M. Chromophobe renal cell carcinoma with microcystic and adenomatous arrangement and pigmentation-a diagnostic pitfall. Morphological, immunohistochemical, ultrastructural and molecular genetic report of 20 cases. Virchows Arch. 2005; 446(4):383-393. 2.224, 0945-6317
  161. Hes O, Vaněček T, Šíma R, Hora M, Veličkinová H, Grossmann P, Kovář J, Michal M. Nádorová onemocnění pacientů se syndromem testikulární feminizace (“androgen insensitivity” syndrom) – popis dvou případů. Ces Gynekol.. 2005; 70 (2):113-117. ---, 1210-7832
  162. Di Palma S, Skalova A, Vanecek T, Simpson RHW, Starek I, Leivo I. Non-invasive (intracapsular) carcinoma ex pleomorphic adenoma: recognition of focal carcinoma by HER-2/neu and MIB1 immunohistochemistry. Histopathology. 2005;46(2):144-152. 2.608, 0309-0167
  163. Daum O, Sima R, Mukensnabl P, Vanecek T, Brouckova M, Benes Z, Michal M: Pigmented solid-pseudopapillary neoplasm of the pancreas. Pathol Int 2005;55:280-284. 0.925, 1320-5463
  164. Kazakov DV, Pitha I, Sima R, Vanecek T, Shelekhova K, Mukensnabl P, Michal M. Hybrid peripheral nerve sheath tumors: schwannoma-perineurioma and neurofibroma- perineurioma. A report of three cases in extradigital locations. Ann Diagn Pathol. 2005;9(1):16-23. ---, 1092-9134
  165. Hes O, Benakova K, Vanecek T, Sima R, Michal M. Clear cell type of renal cell carcinoma with numerous hyaline globules. a diagnostic pitfall. Pathol Int. 2005;55(3):150-154. 0.925, 1320-5463
  166. Hora M, Hes O, Reischig T, Kreuzberg B, Vaněček T, Boudová L, Ferda J, Klečka J, Michal M: Mnohočetné renální karcinomy při terminálním selhání ledvin (Multifocal renal cell carcinoma in end-stage kidney disease), Urológia, 3/2004, 10: 7-11. ---, 1335-3071
  167. Daum O, Vanecek T, Sima R, Curik R, Zamecnik M, Yamanaka S, Mukensnabl P, Benes Z, Michal M. Reactive nodular fibrous pseudotumor of the gastrointestinal tract. Report of eight cases. Int J Surg Pathol 2004;12(4):365-374. 0.833, 1066-8969
  168. Vanecek T, Sima R, Hes O, Hora M. Molekulární charakteristika vybraných nádorů ledvin (invited review). Urol listy 2004;3:45-52. ---, 1214-2085
  169. Michal M, Vanecek T, Sima R, Mukensnabl P, Boudova L, Brouckova M. Primary Capillary Hemangioblastoma of Peripheral Soft Tissues. A Case Report. Am J Surg Pathol 2004;28(7):962-966. 4.690, 0147-5185
  170. Vanecek T, Vorel F, Sip M. Mitochondrial DNA D-loop hypervariable regions: Czech population data. Int J Legal Med. 2004;118:14-18. 2.106, 0937-9827
  171. Daum O, Hes O, Vanecek T, Benes Z, Sima R, Zamecnik M, Mukensnabl P, Hadravska S, Curik R, Michal M. Vanek’s tumor (inflammatory fibroid polyp). Report of 18 cases and comparison with three cases of original Vanek’s series. Ann Diagn Pathol. 2003;7: 337-347. ---, 1092-9134
  172. Hes O, Hora M, Vanecek T, Sima R, Sulc M, Havlicek F, Beranova M, Michal M. Conventional renal cell carcinoma with granulomatous reaction: a report of three cases. Virchows Arch. 2003;443(2):220-221. 2.357, 0945-6317
  173. Skalova A, Starek I, Vanecek T, Kucerova V, Plank L, Szepe P, Di Palma S, Leivo I. Expression of HER-2/neu gene and protein in salivary duct carcinomas of parotid gland as revealed by fluorescence in-situ hybridization and immunohistochemistry. Histopathology. 2003;42(4):348-356. 2.952, 0309-0167
  174. Skálova A, Vaněček T, Lošan F, Papoutsidesova L, Fínek J. Detection of HER-2/neu in breast carcinoma Čas Lék Česk. 2003;142(2):93-98. ---, 0008-7335
  175. Boudová L, Vaněček T, Šíma R, Bouda J, Hes O, Fakan F. Role proteinu p27 kip1 v buněčném cyklu a jeho výskyt v lymfoidních tkáních, zvláště v nehodgkinských B-lymfomech. Přehled problematiky. Čes Slov Patol. 2003;39:126-129. ---, 1210-7875
  176. Hes O, Vaněček T, Hora M, Boudová L, Mares J, Reischig T, Michal M. Mnohočetné nádory nativní nefunkční ledviny u pacienta s transplantovanou ledvinou (Multiple tumours of the native non-functional kidney in patient with transplant kidney). Čes Urol. 2003;7: 43-46. ---, 1211-8729
  177. Skálova A, Stárek I, Vaněček T, Kučerova V, Plank L, Szepe P. Amplification and overexpression of HER-2/neu in parotid gland salivary duct carcinoma. Immunohistochemical study and fluorescence in situ hybridization. Čes Slov Patol. 2002;38 Suppl 1:27-34. ---, 1210-7875

Kapitoly v knihách

  1. Vaněček T, Pešek M, Baxa J, Mukenšnábl P, Grossmann P. Nemocná s unikátní přestavbou genů PURA-ALK s dobrou odpovědí na cílenou léčbu krizotinibem. In: Pneumoonkologie v kazuistikách: Úspěchy a kontroverze v hrudní onkologii (Ed. Pešek M), Maxdorf 2018, Praha, Czech Republic, p. 179-180.
  2. Vaněček T, Růžičková Kirchnerová O, Mukenšnábl P. NUT středočárové karcinomy mezihrudí. In: Pneumoonkologie v kazuistikách: Úspěchy a kontroverze v hrudní onkologii (Ed. Pešek M), Maxdorf 2018, Praha, Czech Republic, p. 44-50.
  3. Skalova A, Vanecek T, Starek I. Malignant Salivary Gland Neoplasms – Etiology. In: Salivary Gland Disorders and Diseases: Diagnosis and Management (Eds Bradley PJ, Guntinas-Lichius O), Georg Thieme Verlag 2011, Stuttgart, Germany, Chapter V, p. 252-261.
  4. Skalova A, Vanecek T, Starek I. Benign Salivary Gland Neoplasms – Etiology. In: Salivary Gland Disorders and Diseases: Diagnosis and Management (Eds Bradley PJ, Guntinas-Lichius O), Georg Thieme Verlag 2011, Stuttgart, Germany, Chapter IV, p. 187-192.
  5. Skalova A, Vanecek T, Kinkor Z, Michal M. Detection of HER-2/neu status by immunohistochemistry and fluorescence in situ hybridization in breast cancer. In: Progress in Oncogene Research (Ed Peale LS), Nova Science Publishers, NY, Chapter VI, p149-165, 2006. ISBN 1 59454 582 0

Kontakt

Email: vanecek@biopticka.cz